Caenorhabditis elegans metagenome E007403_19 - SRA

SRX22951712: Caenorhabditis elegans metagenome E007403_19
1 ILLUMINA (Illumina MiSeq) run: 37,348 spots, 22.5M bases, 11.2Mb downloads

Design: The 16S library was prepared using the 341F and 806R primer covering the V3V4 region of the 16S rRNA gene. Libraries were sequenced on the Miseq platform using the MiSeq Reagent Kit 2 300 bp (Illumina).

Submitted by: Christian-Albrechts-University Kiel

Study: CeMbio43 Microbial Genomes and Sequencing Reads

PRJNA743218 • SRP477922 • All experiments • All runs

show Abstracthide Abstract

Here we introduce the CeMbio43 community, an extended natural microbiota for the nematode Caenorhabditis elegans based on former meta-analysis of the natural microbiome of this nematode (10.1186/s12915-016-0258-1, 10.1038/s41396-019-0504-y, 10.1111/1462-2920.14932, 10.1534/g3.120.401309). This BioProject includes all information related to the single bacteria genome assembly and sequencing.

Sample: CeMbio43 community, control, 66h

SAMN38843244 • SRS19919431 • All experiments • All runs

Organism: invertebrate metagenome

Library:

Name: E007403_19

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 37,348 spots, 22.5M bases, 11.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR27273552	37,348	22.5M	11.2Mb	2023-12-19

ID:: 31016599

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity